Su N, Wang Y, Qian M, Deng M. Predicting MicroRNA targets by integrating sequence and expression data in cancer. 2011 IEEE International Conference on Systems Biology, ISB 2011. 2011:219-224.

Wang Q, Wang L, Qian M, Deng M. A hybridization model for tiling array analysis. 2010 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2010. 2010:148-151.

Su N, Wang L, Wang Y, Qian M, Deng M. Prediction of protein functions from protein-protein interaction data based on a new measure of network betweenness. 2010 4th International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2010. 2010.

Wang F, Hou L, Xu J, Qian M, Deng M. A robust empirical Bayesian method for detecting differentially expressed genes. Proceedings of the 2009 2nd International Conference on Biomedical Engineering and Informatics, BMEI 2009. 2009.

Zheng H, Wang F, Xu J, Zhou N, Qian M, Zhu J, Deng M. Pathway detection based on hierarchical LASSO regression model. Proceedings of the 2009 2nd International Conference on Biomedical Engineering and Informatics, BMEI 2009. 2009.

Wei W, Wan L, Qian M, Deng M. The implementation and application of the microarray preprocessing generalized PDNN model. Proceedings of the 2009 2nd International Conference on Biomedical Engineering and Informatics, BMEI 2009. 2009.

Liu J, Deng M, Qian M. Feature-based causal structure discovery in protein and gene expression data with bayesian network. 5th International Conference on Natural Computation, ICNC 2009. 2009:144-148.

Fu WJ, Li M, Wan L, Deng M, Qian M. On design of oligonucleotide SNP arrays and methods for genotype calling. BioMedical Engineering and Informatics: New Development and the Future - Proceedings of the 1st International Conference on BioMedical Engineering and Informatics, BMEI 2008. 2008:453-458.

Wan L, Deng M, Fu WJ, Qian M. A method to correct systematic bias in Affymetrix SNP arrays. BioMedical Engineering and Informatics: New Development and the Future - Proceedings of the 1st International Conference on BioMedical Engineering and Informatics, BMEI 2008. 2008:442-446.

Huan Y, Minghua D. ClustalY: Speed up the guide tree building for ClustalW. Proceedings - Eighth International Conference on High-Performance Computing in Asia-Pacific Region, HPC Asia 2005. 2005:608-610.

Deng M, Chen T, Sun F. An integrated probabilistic model for functional prediction of proteins. Proceedings of the Annual International Conference on Computational Molecular Biology, RECOMB. 2003:95-103.

Deng M, Mehta S, Sun F, Chen T. Inferring domain-domain interactions from protein-protein interactions. Proceedings of the Annual International Conference on Computational Molecular Biology, RECOMB. 2002:117-126.