科研成果

2025
Wang Y, Xing D, Duan J, Zhou H, Meng L, Geng S, Chen H, Han R, Li Z, Ma J, et al. Responsiveness of anti-VEGF treatment for polypoidal choroidal vasculopathy based on aqueous humour proteomics: A preliminary study. Acta Ophthalmol. 2025;103:e136-e145.Abstract
OBJECTIVES: Patients with polypoidal choroidal vasculopathy (PCV) exhibit variability in response to anti-VEGF therapy. This study aimed to analyse the aqueous humour proteomic profiles of PCV patients and provide preliminary insights for the identification of biomarkers associated with anti-VEGF drug responsiveness. METHODS: PCV patients who were treatment-naïve or untreated for more than 3 months were prospectively recruited from two hospitals in Beijing and Tianjin. Based on the relative changes in central macular thickness (ΔCMT/baseline-CMT) before and after anti-VEGF treatment, the PCV patients were divided into a good response (GR) group (≤-25%) and a poor response (PR) group (>-25%). Aqueous humour proteomics was performed by the Data-independent Acquisition-Mass Spectrometry (DIA-MS) method, and differentially expressed proteins (DEPs) analysis between the different PCV groups and the control group was conducted. Key DEPs were selected for preliminary validation in the aqueous humour using the Luminex method retrospectively. RESULTS: A total of 31 PCV patients (31 eyes) were included, 13 in the GR group and 18 in the PR group. A total of 414 DEPs were identified, including 36 significantly upregulated proteins, such as G protein regulatory factor 10 (RGS10), podocin (PODN) and epidermal growth factor (EGF), and 32 downregulated proteins, including RAB11FIP4 (Rab11 family-interacting protein 4), α-synuclein (SNCA), haemoglobin subunit δ (HBD) and interleukin 6 (IL6). Compared to the cataract control group (10 eyes), 134 proteins were significantly upregulated, and 72 were downregulated. KEGG pathway enrichment analysis revealed that the GR and PR groups differ in terms of cell communication, and cell signal transduction. Protein-protein interaction analysis revealed interactions between EGF and various DEPs. Validation of aqueous humour proteins using the Luminex method revealed that changes in the levels of EGF were associated with the anti-VEGF treatment response in PCV patients. CONCLUSIONS: PCV patients with good or poor anti-VEGF responses exhibit distinct aqueous humour proteomic profiles. Aqueous EGF may serve as a biomarker for the 'precise treatment' of PCV.
Li Z, Goût TL, Hu Y*. Review on formation of iron (oxyhydr)oxide nanoparticles in the environment: interactions with metals, organics and microbes. Environmental and Biogeochemical Processes [Internet]. 2025;1:e003. LinkAbstract
Iron (oxyhydr)oxide nanoparticles (IONPs) are formed in many aquatic and soil systems through nucleation and growth in solution (homogeneous precipitation), and at soil-water interfaces (heterogeneous precipitation). This review summarizes the roles of metal ions, organics, and microbes in the nucleation and growth of IONPs in natural settings. Metal ions can adsorb onto mineral surfaces that act as substrates to modify heterogeneous precipitation processes at soil (mineral/organic)–water interfaces. Further, metal ions could also affect homogeneous precipitation through lattice substitution or surface adsorption onto IONPs. Similarly, organic matter can interfere with heterogeneous IONP formation through adsorbing onto mineral surfaces, and can affect homogeneous IONP formation by complexing with iron ions and adsorbing onto IONP surfaces. Indeed, the physicochemical diversity of mineral surfaces and organic matter properties, especially regarding organic functional groups which have varied complexation and (de)protonation capabilities, can profoundly affect these processes. Microbial influences arise through the production of extracellular polymeric substances (EPS) and the redox modulation of the surrounding environment, which alter electron transfer dynamics and surface reactivity to affect the formation of IONPs. This review provides an integrated view of the roles of metals, organics and microbes in IONP formation, which can not only help in the understanding of the iron cycle, but also the biogeochemical fate of contaminants.
Li Z, Goût TL, Zhang J, Zhao J, Liu J, Hu Y*. Review on stability of iron (oxyhydr)oxide nanoparticles in natural environments: interactions with metals, organics, and microbes. Environmental and Biogeochemical Processes [Internet]. 2025;1:e012. LinkAbstract
Iron (oxyhydr)oxide nanoparticles (IONPs), which are ubiquitous in many natural aquatic and soil systems, can strongly interact with nutrient and contaminant species in the environment through their large specific surface areas and redox reactivity, thus controlling the transport and fate of these elements. Following their formation, IONPs often undergo aggregation and phase transformation processes that collectively determine their long-term environmental stability. The aggregation of IONPs reduces colloidal stability and can lead to deposition and immobilization, whereas stable dispersed colloids can remain mobile and transport associated elements over long distances. The phase transformations of metastable, poorly crystalline IONPs (e.g., ferrihydrite) into more crystalline iron (oxhydr)oxides (e.g., goethite, hematite, and magnetite) profoundly alter particle properties and influence the retention or release of sorbed or structurally incorporated species. This review focuses on IONP aggregation and phase transformation as key processes controlling long-term IONP stability and critically examines how they are influenced by three common environmental factors: metal ions, organic matter (OM), and microbial activity. Metal ions can adsorb to IONP surfaces to modify surface charges or be structurally incorporated to affect IONP crystallography, thereby modulating inter-particle forces and transformation rates. OM can adsorb to IONP surfaces, and, depending on its concentration and molecular characteristics, it can either stabilize particles via electrostatic and/or steric repulsion, or promote aggregation through charge neutralization and bridging effects. Further, organic ligands can also often inhibit IONP transformation or alter transformation pathways by binding to reactive surface sites. Microbial activity influences IONP stability through extracellular polymeric substances (EPS) that coat or bridge particles, and through redox processes that generate or consume Fe(II), thereby either dispersing IONPs or accelerating their transformation into more stable mineral phases. This review summarizes present research on the effects of IONP interactions with metals, organics, and microbes on IONP aggregation and transformation. Such an understanding is crucial for predicting IONP stability and transport in the environment and the long-term cycling of associated organic and inorganic contaminants and nutrients.
Bai X, Zhang G, Xu L, Li K, Zhang M, Huang Y. Rewiring photosynthetic carbon flow: Engineered cyanobacterial factories for sustainable carbohydrate production and carbon-negative biomanufacturing. Bioresource Technology [Internet]. 2025;434:132850. 访问链接Abstract
Cyanobacteria are promising platforms for light-driven carbon fixation and carbohydrate biosynthesis. However, optimization strategies that focus solely on carbon allocation are insufficient to achieve substantial improvements in yield and sustainability. Here, Synechococcus elongatus PCC 7942 was engineered to enhance sucrose production by simultaneously increasing total carbon input and reinforcing the artificial sink. The engineered strain secreted 5.821 g L−1 sucrose, which was 27.4 times higher than the wild-type. Transcriptomic analysis revealed upregulation of abundant genes involved in carbon fixation, sucrose biosynthesis, and electron transport chains. Furthermore, a synthetic light-driven consortium was established to directly convert CO2 into value-added compounds. This system produced 323.5 mg L−1 polyhydroxybutyrate, reducing CO2 emissions by 12.4 g per g of polyhydroxybutyrate compared to conventional heterotrophic processes. These findings highlight the potential of cyanobacteria-based systems for carbon-negative biomanufacturing, demonstrating their role in advancing sustainable carbohydrate and biochemical production while exemplifying circular bioeconomy principles.
Xie J. Rigidity in Complex Dynamics: Multiplier Spectrum and Dynamical André-Oort Conjecture. [Internet]. 2025. arXiv
Wang Z, Hu Z, Shao L. Rigorous Analytic Solution to the Gravitational-wave Overlapping Event Rates. Astrophys. J. 2025;991:108.
Dang, Q. MCGFJ &. The role of the left medial prefrontal cortex and posterior cingulate cortex in processing positive emotional words: evidence from a meta-analysis and an empirical study. , 230(. Brain Structure and Function [Internet]. 2025;230(6):1-19. 访问链接
Wu D, Wu X, Qu T. Room Geometry Inference Using Localization of the SoundSource and Its Early Reflections, in the AES 158th Convention. Warsaw, Poland; 2025:10215.Abstract
Traditional methods for inferring room geometry from sound signals are predominantly based on Room ImpulseResponse (RIR) or prior knowledge of the sound source location. This significantly restricts the applicability ofthese approaches. This paper presents a method for estimating room geometry based on the localization of directsound source and its early reflections from First-Order Ambisonics (FOA) signals without the prior knowledge ofthe environment. First, this method simultaneously estimates the Direction of Arrival (DOA) of the direct sourceand the detected first-order reflected sources. Then, a Cross-attention-based network for implicitly extractingthe features related to Time Difference of Arrival (TDOA) between the direct source source and the first-orderreflected sources is proposed to estimate the distances of the direct and the first-order reflected sources. Finally,the room geometry is inferred from the localization results of the direct and the first-order reflected sources. Theeffectiveness of the proposed method was validated through simulation experiments. The experimental resultsdemonstrate that the method proposed achieves accurate localization results and performs well in inference of roomgeometry.
Zhang X, Chen Z, Chen G, Feng X, Shen Q, Wu Z. RPPFL: Robust and Privacy-Preserving Federated Learning via Trusted Execution Environments, in 2025 IEEE International Conference on Acoustics, Speech and Signal Processing, ICASSP 2025, Hyderabad, India, April 6-11, 2025. IEEE; 2025:1–5. 访问链接
Chen B, Shen Q, Xue L, She J, Zhang X, Luo X, Zhang X, Chen W, Wu Z. SACK: Enabling Environmental Situation-Aware Access Control for Vehicles in Linux Kernel, in Design, Automation & Test in Europe Conference, DATE 2025, Lyon, France, March 31 - April 2, 2025. IEEE; 2025:1–7. 访问链接
Guo R, Yue W, Qu L, Qi Y, Niu D, Ying X. SalienTR: A closer look at multi-modal transformer for RGB-T salient object detection. Expert Syst. Appl. [Internet]. 2025;286:128068. 访问链接
Ampah JD, Jin C, Liu H, Schenuit F, Afrane S, Adun H, Ho DT, Morrow D, Ou Y, Zhang X, et al. Scaling carbon removal without delaying emission reductions. Nature Reviews Clean Technology [Internet]. 2025:1-3. [Link]
Liu J, Tanaka M, Wang X-P, Zhang J-J, Zheng Z. Scattering Entanglement Entropy and Its Implications for Electroweak Phase Transitions. 2025.
Xu L, Wang E, Kang Y, Fu D, Luo L, Quan Y, Xi Y, Huang J, Cui X, Zeng J. Schottky nanodiodes array enabled triboelectric nanosecond pulse generator for ultralow-cost tumor therapy. Device. 2025.
Screening and bioinformatics analysis of hub genes of bronchial asthma based on GEO database chip. Chinese Journal of Immunology [Internet]. 2025. 访问链接Abstract
目的:利用生物信息学方法寻找与哮喘发病相关的关键基因并讨论其分子机制。方法:对 GSE143303芯片数据进行加权基因共表达网络分析(WGCNA),筛选出与哮喘发病显著相关的模块,并对模块基因进行蛋白质相互作用(PPI)网络分析、功能及通路富集分析。将WGCNA分析结果与差异表达基因取交集得到关键基因,使用miRDB、miRwalk数据库预测关键基因的上游 miRNAs,并利用 Cytoscape 构建关键 mRNA-miRNA 调控网络。利用 GSE147878数据集对关键基因表达量进行验证,依据ROC曲线评估关键基因的诊断价值。结果:magenta模块和purple模块基因与哮喘显著相关,主要涉及Wnt信号通路、细胞黏附等。共得到 13 个关键基因,包括 ATP6V1G1、TXNDC17、NDUFA4、RHOA、SEC61B、RPS3A、PSMC5、GSPT1、MBP、SMARCC2、GNL3L、RPL7L1、RAD21 及其潜在的 miRNA-mRNA 调控网络。结论:ATP6V1G1、GSPT1、SEC61B 等关键基因在支气管哮喘中起重要作用,并具有一定的临床诊断价值。
Putz F, Beirami S, Schmidt MA, May MS, Grigo J, Weissmann T, Schubert P, Höfler D, Gomaa A, Hassen BT, et al. The Segment Anything foundation model achieves favorable brain tumor auto-segmentation accuracy in MRI to support radiotherapy treatment planning. Strahlentherapie und Onkologie. 2025;201:255–265.
Ma H, Li Y, Hao J, Wu Y, Shi R, Peng R, Shan L, Cai Y, Tang K, Liu K, et al. Selective Laser Doping and Dedoping for Phase Engineering in Vanadium Dioxide Film. Small Methods [Internet]. 2025;9:2400832. 访问链接Abstract
Abstract Vanadium dioxide (VO2), renowned for its reversible metal-to-insulator transition (MIT), has been widely used in configurable photonic and electronic devices. Precisely tailoring the MIT of VO2 on micro-/nano-scale is crucial for miniaturized and integrated devices. However, existing tailoring techniques like scanning probe microscopy, despite their precision, fall short in efficiency and adaptability, particularly on complex or curved surfaces. Herein, this work achieves the local engineering of the phase of VO2 films in high efficiency by employing laser writing to assist in the hydrogen doping or dedoping process. The laser doping and laser dedoping technique is also highly flexible, enabling the fabrication of reconfigurable, non-volatile, and multifunctional VO2 devices. This approach establishes a new paradigm for creating reconfigurable micro/nanophotonic and micro/nanoelectronic devices.
Gomaa A, Huang Y, Stephan P, Breininger K, Frey B, Dörfler A, Schnell O, Delev D, Coras R, Donaubauer A-J, et al. A self-supervised multimodal deep learning approach to differentiate post-radiotherapy progression from pseudoprogression in glioblastoma. Scientific Reports. 2025;15:17133.
Zhong Y, Yang C, Zhao S, Jiang T. Semi-Supervised Blind Quality Assessment with Confidence-quantifiable Pseudo-label Learning for Authentic Images, in Proceedings of the 42nd International Conference on Machine Learning. Vancouver, Canada: PMLR 267; 2025. 访问链接Abstract
This paper presents CPL-IQA, a novel semi-supervised blind image quality assessment (BIQA) framework for authentic distortion scenarios. To address the challenge of limited labeled data in IQA area, our approach leverages confidence-quantifiable pseudo-label learning to effectively utilize unlabeled authentically distorted images. The framework operates through a preprocessing stage and two training phases: first converting MOS labels to vector labels via entropy minimization, followed by an iterative process that alternates between model training and label optimization. The key innovations of CPL-IQA include a manifold assumption-based label optimization strategy and a confidence learning method for pseudo-labels, which enhance reliability and mitigate outlier effects. Experimental results demonstrate the framework's superior performance on real-world distorted image datasets, offering a more standardized semi-supervised learning paradigm without requiring additional supervision or network complexity.
Kang Y, Zhu J-P, Yang Y-H, Wang Z, Troja E, Zhang B, Shao L, Li Z. Shared properties of merger-driven long-duration gamma-ray bursts. Astron. Astrophys. 2025;698:A250.

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