科研成果

2022
Liu Z, Xie X, Huang Z, Lin F, Liu S, Chen Z, Qin S, Fan* X, Chen* PR. Spatially resolved cell tagging and surfaceome labeling via targeted photocatalytic decaging. Chem. 2022;8:2179-2191.Abstract
Summary Spatially resolved in situ tagging of the cell of interest is crucial for in-depth mechanistic dissection of multicellular architectures or processes. With continuing interest in bioorthogonal photocatalytic decaging chemistry, we herein report the extracellular-targeted photocatalytic decaging system (CAT-Ex) for spatially resolved cell tagging and surface proteome profiling under living conditions. An antibody-conjugated photocatalysis system was established and extensively validated, enabling photocatalytic decaging of biotin precursors and proximal quinone methide probes on target cells. Visible-light-controlled selective cell tagging in cell mixture as well as in primary cells from tumor xenografts were demonstrated. Spatially resolved membrane proteome profiling was further achieved by coupling quinone methide decaging chemistry with CAT-Ex, revealing a potential microdomain protein cluster surrounding the endogenous HER2 receptor. Finally, we expanded our strategy to photocatalytic prodrug decaging for selective tumor cell killing, establishing CAT-Ex as a general platform for diverse photo-controlled molecular manipulations on targeted cells with spatial-temporal precision.
Jing Q, Liu J, Chen A, Chen A, Liu J*. The spatial-temporal chemical footprint of pesticides in China from 1999 to 2018. Environmental Science and Pollution Research [Internet]. 2022. 访问链接
Gu J. Spatiotemporal dynamics of the patent race: empirical evidence from listed companies in China. Asian Journal of Technology Innovation [Internet]. 2022;30(1):106-133. 访问链接Abstract
This quantitative study was based on data from 910 Chinese listed companies, spanning from 2002 to 2017. It finds that the geographic distribution for patent competition is spatially dispersed from China’s Southeast Coast to the Northwest. This demonstrates that companies in Western and Northern China are increasingly innovative. In terms of time, the number of patents that enterprises produce has trended upward since 2010, and patent competition among enterprises is intensifying. Moreover, there is a strategic interaction between neighbouring companies in patent competition. Invention patents have a positive spillover effect, while non-invention patents have a negative spillover effect. This study also shows that the larger the scale of the enterprise and the higher its operating income, the more patents it has. The influence of enterprise age on total patents and invention patents is inversely related. Additionally, the more concentrated the company’s equity, the fewer the patents, and the higher the industry concentration, the greater the number of patents. Further, regional economic growth has a positive effect on total patents, while the regional unemployment rate has a negative effect on invention patents.
Ding Z, Zhao R, Zhang J, Gao T, Xiong R, Yu Z*, Huang T. Spatio-Temporal Recurrent Networks for Event-Based Optical Flow Estimation, in Thirty-Sixth AAAI Conference on Artificial Intelligence (AAAI).; 2022.Abstract
Event camera has offered promising alternative for visual perception, especially in high speed and high dynamic range scenes. Recently, many deep learning methods have shown great success in providing model-free solutions to many event-based problems, such as optical flow estimation. However, existing deep learning methods did not address the importance of temporal information well from the perspective of architecture design and cannot effectively extract spatio-temporal features. Another line of research that utilizes Spiking Neural Network suffers from training issues for deeper architecture. To address these points, a novel input representation is proposed that captures the events temporal distribution for signal enhancement. Moreover, we introduce a spatio-temporal recurrent encoding-decoding neural network architecture for event-based optical flow estimation, which utilizes Convolutional Gated Recurrent Units to extract feature maps from a series of event images. Besides, our architecture allows some traditional frame-based core modules, such as correlation layer and iterative residual refine scheme, to be incorporated. The network is end-to-end trained with self-supervised learning on the Multi-Vehicle Stereo Event Camera dataset. We have shown that it outperforms all the existing state-of-the-art methods by a large margin.
Wang Y. A SPICE-Based Simulation Method for System Efficient Electrostatic Discharge Design (invited talk), in 6th IEEE Electron Devices Technology and Manufacturing Conference (EDTM). Oita, Japan: IEEE Press; 2022.Abstract
Based on system efficient electrostatic discharge design (SEED) methodology, this paper proposes a high-order SPICE simulation methodology to predict the performance of the ESD protection circuits. The related PCB-level experiments of the selected protection circuits are fulfilled to verify this method. As a result, the consistency of the comparison results between the simulation and measurement illustrates that the method can accurately predict the performance of system-level protection circuits.
Zhao J, Zhang S*, Ma L*, Yu Z, Huang T. SpikingSIM: A Bio-Inspired Spiking Simulator, in IEEE International Symposium on Circuits and Systems (ISCAS).; 2022.Abstract
Large-scale neuromorphic dataset is costly to construct and difficult to annotate because of the unique high-speed asynchronous imaging principle of bio-inspired cameras. Lacking of large-scale annotated neuromorphic datasets has significantly hindered the applications of bio-inspired cameras in deep neural networks. Synthesizing neuromorphic data from annotated RGB images can be considered to alleviate this challenge. This paper proposes a simulator to generate simulated spiking data from images recorded by frame cameras. To minimize the deviationsbetween synthetic data and real data, the proposed simulator named SpikingSIM considers the sensing principle of spiking cameras, and generates high-quality simulated spiking data, e.g., the noises in real data are also simulated. Experimental results show that, our simulator generates more realistic spiking data than existing methods. We hence train deep neural networks with synthesized spiking data. Experiments show that, the network trained by our simulated data generalizes well on real spiking data. The source code of SpikingSIM is available at http://github.com/Evin-X/SpikingSIM.
Zhou X, Liang Y, Fu H, Zhu R, Wang J, Cong X, Tan C, Zhang C, Zhang Y, Wang Y, et al. Step-climbing epitaxy of layered materials with giant out-of-plane lattice mismatch. Adv. Mater. [Internet]. 2022;2202754. 访问链接Abstract
Heteroepitaxy with large lattice mismatch remains a great challenge for high-quality epifilm growth. Although great efforts have been devoted to epifilm growth with an in-plane lattice mismatch, the epitaxy of 2D layered crystals on stepped substrates with a giant out-of-plane lattice mismatch is seldom reported. Here, taking the molecular-beam epitaxy of 2D semiconducting Bi2O2Se on 3D SrTiO3 substrates as an example, a step-climbing epitaxy growth strategy is proposed, in which the n-th (n = 1, 2, 3…) epilayer climbs the step with height difference from out-of-plane lattice mismatch and continues to grow the n+1-th epilayer. Step-climbing epitaxy can spontaneously relax and release the strain from the out-of-plane lattice mismatch, which ensures the high quality of large-area epitaxial films. Wafer-scale uniform 2D Bi2O2Se single-crystal films with controllable thickness can be obtained via step-climbing epitaxy. Most notably, one-unit-cell Bi2O2Se films (1.2 nm thick) exhibit a high Hall mobility of 180 cm2 V−1 s−1 at room temperature, which exceeds that of silicon and other 2D semiconductors with comparable thickness. As an out-of-plane lattice mismatch is generally present in the epitaxy of layered materials, the step-climbing epitaxy strategy expands the existing epitaxial growth theory and provides guidance toward the high-quality synthesis of layered materials.
Ye C, Xue C, Liu P, Zhang C, Ma Z, Zhang Y, Liu C, Liu J, Lu K, Mu Y. Strong impacts of biomass burning, nitrogen fertilization, and fine particles on gas-phase hydrogen peroxide (H2O2). Science of The Total Environment. 2022;843:156997.
Li Y, He L, Xie D, Zhao A, Wang L, Kreisberg NM, Jayne J, Liu YJ. Strong temperature influence and indiscernible ventilation effect on dynamics of some semivolatile organic compounds in the indoor air of an office. Environment International [Internet]. 2022;165:107305. 访问链接Abstract
Many manmade organic air pollutants are semivolatile and primarily used and exposed indoors. It remains unclear how indoor environmental parameters affect indoor air dynamics of semivolatile organic compounds (SVOCs) in real-world indoor conditions, which directly relates to human exposure. By making time-resolved SVOC measurements over multiple weeks in an office, we characterized the indoor air dynamics of six representative SVOCs which were mainly present in the gas phase and of indoor origins, and investigated the effects of the temperature and ventilation rate. The six species include di-isobutyl phthalate and di-n-butyl phthalate, as well as two n-alkanes and two siloxanes. Airborne concentrations of all six SVOCs responded strongly and quickly to changes in the indoor temperature. The temperature dependence of individual species can be well fitted in the form of the van't Hoff equation, and explained 65–86% of the observed variation in the logarithm-transformed concentrations. In contrast, increasing the ventilation rate by a factor of 3–5 for hours at a constant temperature had no discernible influence on the SVOC concentrations. Further kinetic modeling analysis suggests that the observed fast temperature response and indiscernible ventilation effect are both associated with SVOC sorption onto indoor surfaces, which dramatically slows the response of SVOC concentration to changes in the ventilation rate and speeds up the response to changes in the temperature. These results highlight the importance of sorption reservoirs on regulating indoor SVOC dynamics and also have important implications for controlling and assessing indoor air exposure to SVOCs.
Wang C, Cheng T, Liu Z, Liu* F, Huang* H. Structural amorphization-induced topological order. Phys. Rev. Lett. [Internet]. 2022;128:056401. 访问链接
Huang D, Murakami M, Brodholt J, McCammon C, Petitgirard S. Structural evolution in a pyrolitic magma ocean under mantle conditions. Earth and Planetary Science Letters [Internet]. 2022;584:117473. 访问链接Abstract
Structure and properties of terrestrial magma oceans control the co-evolution of the core, mantle and atmosphere of the early Earth, but are poorly understood because discrepancies remain between experiments and theoretical calculations. Here we combine acoustic velocity measurements and ab initio simulations on pyrolite glass/melt with a silicate Earth-like composition. In the complex system, we find a gradual increase of sound velocity with increasing pressure. Through ab initio simulations, this is explicable by the transition from four- to six-fold coordinated Si occurring over the entire mantle regime. These results are at odds with recent X-ray diffraction measurements, which show an abrupt change in Si-O coordination at 35 GPa. It is however consistent with recent high-pressure data, where Ni partitioning between molten metal and silicate exhibits a similar gradual change with pressure. Unlike amorphous silica, smooth structural evolution in a multicomponent system implies progressive changes in magma ocean properties with depth, such as density, element partitioning and transport properties, which, when incorporated into magma ocean models, may improve our understanding of early history of the Earth and other rocky planets.
Zheng JY, Peng Y, Wei J, Guo S, He LY, Huang XF. Study on effective density of size-resolved particles and the influencing factors in Shenzhen. Zhongguo Huanjing Kexue/China Environmental ScienceZhongguo Huanjing Kexue/China Environmental Science. 2022;42:1526-1533.
Lou X, Sun Y, Lv D, Yin Y, Pei J, He J, Yang X, Cui X, Liu YJ, Norback D, et al. A study on human perception in aircraft cabins and its association with volatile organic compounds. Building and Environment [Internet]. 2022;219:109167. 访问链接Abstract
More than 8 million people fly on commercial aircraft each day with approximately 5% having a pre-existing respiratory disease. Thus it is necessary to provide high air quality in aircraft to protect public health. Volatile organic compounds (VOCs) present in aircraft cabins are suspected to contribute to the reported complaints. We investigated concentrations of VOCs, air temperature, relative humidity, and CO2 concentrations in a total of 46 flights, including 26 Chinese domestic flights and 20 international flights. We focused on the data from the cruising phase without meal serving in which the air supply and air recirculation were steady. A total of 284 passengers (i.e., 101 on international flights and 183 on Chinese domestic flights) were invited to participate in questionnaire surveys in this phase. We performed a linear mixed model analysis by controlling for potential confounders (age, gender, smoke habits, and history of allergy) to study associations between VOCs exposures and passengers' complaints. Xylene was significantly associated with irritations of the eyes, nose, and throat on both international and domestic flights, with antilog beta values from 1.12 to 1.28 (p < 0.05). The association of some aldehydes (i.e., nonanal, decanal, and heptanal), which are potential oxidation products with ozone, with passengers' sensory irritations was also significant, especially during international flights (antilog beta values: 1.19–1.22). It indicates that VOCs, especially xylene and aldehydes, in aircraft cabins may influence the perceived indoor air quality and complaints among passengers.
Sulfate mineral scaling: From fundamental mechanisms to control strategies
Cao Z, Hu Y*, Zhao H, Cao B, Zhang P*. Sulfate mineral scaling: From fundamental mechanisms to control strategies. Water Research [Internet]. 2022;222:118945. LinkAbstract
Sulfate scaling, as insoluble inorganic sulfate deposits, can cause serious operational problems in various industries, such as blockage of membrane pores and subsurface media and impairment of equipment functionality. There is limited article to bridge sulfate formation mechanisms with field scaling control practice. This article reviews the molecular-level interfacial reactions and thermodynamic basis controlling homogeneous and heterogeneous sulfate mineral nucleation and growth through classical and non-classical pathways. Common sulfate scaling control strategies were also reviewed, including pretreatment, chemical inhibition and surface modification. Furthermore, efforts were made to link the fundamental theories with industrial scale control practices. Effects of common inhibitors on different steps of sulfate formation pathways (i.e., ion pair and cluster formation, nucleation, and growth) were thoroughly discussed. Surface modifications to industrial facilities and membrane units were clarified as controlling either the deposition of homogeneous precipitates or the heterogeneous nucleation. Future research directions in terms of optimizing sulfate chemical inhibitor design and improving surface modifications are also discussed. This article aims to keep the readers abreast of the latest development in mechanistic understanding and control strategies of sulfate scale formation and to bridge knowledge developed in interfacial chemistry with engineering practice.
Wang J, Pan R, Dong P, Liu S, Chen Q, Borthwick AGL, Sun L, Xu N, Ni J. Supercarriers of antibiotic resistome in a world's large river. MicrobiomeMicrobiome. 2022;10.Abstract
Background: Antibiotic resistome has been found to strongly interact with the core microbiota in the human gut, yet little is known about how antibiotic resistance genes (ARGs) correlate with certain microbes in large rivers that are regarded as "terrestrial gut." Results: By creating the integral pattern for ARGs and antibiotic-resistant microbes in water and sediment along a 4300-km continuum of the Yangtze River, we found that human pathogen bacteria (HPB) share 13.4% and 5.9% of the ARG hosts in water and sediment but contribute 64% and 46% to the total number of planktonic and sedimentary ARGs, respectively. Moreover, the planktonic HPB harbored 79 ARG combinations that are dominated by "natural" supercarriers (e.g., Rheinheimera texasensis and Noviherbaspirillum sp. Root189) in river basins. Conclusions: We confirmed that terrestrial HPB are the major ARG hosts in the river, rather than conventional supercarriers (e.g., Enterococcus spp. and other fecal indicator bacteria) that prevail in the human gut. The discovery of HPB as natural supercarriers in a world's large river not only interprets the inconsistency between the spatial dissimilarities in ARGs and their hosts, but also highlights the top priority of controlling terrestrial HPB in the future ARG-related risk management of riverine ecosystems globally.
Ren Y, Zhao J, Glauben T, Castro Campos B. Supermarket Environment and Nutrition Outcomes: Evidence from Rural China. Journal of Rural Studies. 2022;92:79-92.
Ji X, Liu X, Yang W, Xu T, Wang X, Zhang X, Wang L, Mao X, Wang X. Sustainable phosphorus recovery from wastewater and fertilizer production in microbial electrolysis cells using the biochar-based cathode. Science of The Total Environment. 2022;807:150881.
Ji X, Liu X, Yang W, Xu T, Wang X, Zhang X, Wang L, Mao X, Wang X. Sustainable phosphorus recovery from wastewater and fertilizer production in microbial electrolysis cells using the biochar-based cathode. Science of The Total Environment. 2022;807:150881.
Xie K. Symptoms of Imperial Paranoia: Colonial Policing, Imprisonment, and Exile from a Southeast Asian Perspective. The Foundation for Law and International Affairs Review [Internet]. 2022;3(1):54-57. 访问链接Abstract
A panel discussion on "Empire and Regional Order", in which I discussed two related issues: 1. how to do research on the history of regional politics? 2. how to make sense of the unwritten by following what Ann Laura Stoler called “archival grains”.
Shi W, Yang X, Li X, Meng L, Zhang D, Zhu Z, Xiao X, Zhao D*. Syntheses of Anthracene-centered Large PAH Diimides and Conjugated Polymers. Chem. Eur. J. [Internet]. 2022;28(24):e202104598. [Read Online]Abstract
Polycyclic aromatic hydrocarbon (PAH) structures with suitable electron-withdrawing groups are useful building blocks for developing optical and electron-transporting materials. Here, we report the application of double benzannulation processes to synthesize PAH diimides with enlarged π-frameworks featuring a central anthracene moiety. The processes are realized by copper-catalyzed [4+2] cycloaddition of ethynyl-substituted aromatic dicarobximide to 2,5-bis(phenylethynyl)terephthalaldehyde, followed by intramolecular photocyclization or direct arylation via Heck cross coupling. Specifically, A central symmetric benzo[1,2- k :4,5- k ']-bis(fluoranthene)-3,4,12,13-tetracarboxyl diimide (BFDI) is acquired, with a single crystal revealing its completely planar polycyclic skeleton. Such a shape-persistent PAH expectedly exhibits a tendency to stack face-to-face and forms J-aggregates. Moreover, BFDI can be expediently difunctionalized site-selectively in reactive 9 and 10 positions of the anthracene unit and applied to prepare conjugated polymers. When coupled with 1,4-diketopyrrolo[3,4- c ]-pyrrole (DPP) via thiophene and dithiophene linkers, two significantly broadened absorption bands extended to the near-infrared regime appear, evidencing the effective π-conjugative extension ability of BFDI unit.

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